Max Dudek
Graduate Student
Philadelphia, Pennsylvania, United States
Summary
👤
Senior🎓
Top SchoolMax Dudek is a PhD candidate in Genomics and Computational Biology at the University of Pennsylvania with eight years of experience building computational tools for biological data. His research blends data science and human disease genetics, supported by an NSF fellowship and hands-on software development from undergraduate work through graduate research. He has a strong engineering background—rewriting ML software from Java to C++ to produce an R library, creating WESTPA tutorials for molecular simulation, and building searchable scientific databases—demonstrating an ability to translate research needs into robust, reusable code. Based in Philadelphia, he pairs rigorous academic training (BS in Computer Science and Computational Biology, 4.0) with practical HPC and bioinformatics tooling experience that accelerates genomics discovery.
8 years of coding experience
2 years of employment as a software developer
High School Diploma, 4.0, High School Diploma, 4.0 at St. Joseph's Collegiate InstituteBachelor of Science - BS, Computer Science and Computational Biology, 4.0, Bachelor of Science - BS, Computer Science and Computational Biology, 4.0 at University of PittsburghDoctor of Philosophy - PhD, Genomics and Computational Biology, Doctor of Philosophy - PhD, Genomics and Computational Biology at University of Pennsylvania
Github Skills (50)
typography8
mathml8
latex8
mathjax8
r-package8
pattern-recognition7
bioinformatics7
mathematics7
seq7
pdb7
occupancy7
causal7
command-line-tool6
prediction6
computational-biology6
Programming languages (8)
Github contributions (5)
maxdudek/crystallizationDatabase
Jul 2018 - Jan 2021
Tools to create and search a Python-based database of crystallization conditions and sequences pulled from the PDB
Contributions:28 commits, 5 PRs, 18 pushes in 2 years 6 months
pythonpdbdatabasecrystallizationconditions
maxdudek/elasticsearch-test
Aug 2019 - Aug 2020
Contributions:15 pushes, 1 branch in 11 months
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