Menachem Sklarz
Lecturer & Course Coordinator
Beer Sheva, South District, Israel
Summary
👤
Senior🎓
Top SchoolMenachem Sklarz is a computational biologist and lecturer with nine years of professional experience building bioinformatics infrastructure and teaching practical data-analysis courses in both Hebrew and English. He has led genomics and bioinformatics at Equinom, creating databases and a software framework that supported genomic breeding, and developed NeatSeq-Flow, a Python package for automating high-throughput sequencing workflows. His technical strengths span NGS analysis (RNA-seq, ChIP-seq, metagenomics), statistical modeling in R/Bioconductor, database design and data engineering, grounded by a PhD in microbiology and mathematical wastewater treatment. Comfortable bridging academia and industry, he repeatedly translates complex biological problems into reproducible pipelines and teachable curricula. Notably, his background combines hands-on software development from early Visual C++ projects to modern Python/R tooling, giving him rare depth across computational, experimental and educational domains.
9 years of coding experience
6 years of employment as a software developer
Netiv Meir High SchoolMasters, Mathematical Biology, Masters, Mathematical Biology at Bar-Ilan UniversityPhD, Microbiology and mathematics of wastewater treatment, PhD, Microbiology and mathematics of wastewater treatment at Ben-Gurion University of the Negev
English, Hebrew
Stackoverflow
31reputation
2kreached
0answers
2questions
Github Skills (17)
seq9
rna-seq8
python8
terminate6
sequence6
bioinformatics6
auto-increment6
bash6
assembly6
mariadb6
bam4
structural-variation4
fasta3
genomics3
bioconda3
Programming languages (4)
Github contributions (5)
bioinfo-core-BGU/neatseq-flow-modules
Apr 2018 - Jul 2019
Shared Modules and Workflows for NeatSeq-Flow
Contributions:3 releases, 327 commits, 2 PRs in 1 year 2 months
workflowsworkflow
bioinfo-core-BGU/split_library_log_parser
Jan 2017 - Jul 2019
Contributions:10 pushes, 1 branch in 2 years 6 months
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