Michael Imelfort

Organiser Lead Organiser at HealthHack

Brisbane City, Queensland, Australia
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Summary

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Senior
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Top School
Michael Imelfort is a mathematically trained software engineer and former scientist with over a decade of hands-on experience building data-driven systems, pipelines and visualization tools across research and commercial settings. He specializes in large-scale data analytics, scientific computing and automation, with deep expertise in Python, Linux administration and cloud-first CI/CD for genomics and mapping workflows. His background spans algorithm development, infrastructure as code and end-to-end pipeline testing—skills honed while building a cloud-native genomics stack using Nextflow, Docker and AWS and managing >100-node Linux clusters. A long-time organiser of Brisbane’s HealthHack, he blends technical delivery with community leadership and an appetite for pragmatic, reproducible engineering in research-style environments. Notably comfortable operating at every layer of the data stack, he’s equally at home optimizing resource usage as designing algorithmic test harnesses for complex pipelines.
code12 years of coding experience
job7 years of employment as a software developer
bookPhD, Bioinformatics, PhD, Bioinformatics at The University of Queensland
bookB.Sc, Applied Mathematics and Statistics, B.Sc, Applied Mathematics and Statistics at Griffith University
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Github Skills (36)

file-manipulation10
genome8
genomics8
metagenomics8
bioinformatics8
binning7
reproducible-research7
nextflow7
points6
graph6
elasticsearch-cluster6
reproducible-science6
slurm6
singularity6
pipeline5

Programming languages (9)

HCLC++ShellCJavaScriptGroovyRubyCython

Github contributions (5)

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minillinim/outstandingKnife

Mar 2015 - Apr 2025

Contributions:1 push, 1 branch in 10 years 2 months
The main website
Contributions:145 commits, 9 PRs, 119 pushes in 3 months
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