Michael Sioda
Senior Java Developer at Bank of America
Mesa, Arizona, United States
Summary
👤
Senior🎓
Top SchoolMichael Sioda is a Senior Java Developer with 10+ years building and operating mission-critical enterprise systems and a PhD candidate in Bioinformatics, blending production-grade software engineering with domain knowledge in genomics. At Bank of America he architects and supports high-throughput, compliant platforms that process billions of messages and oversee disaster recovery for multi-national data centers, while his research work produced BioLockJ, an open-source pipeline that has powered multiple published microbiome analyses and was adapted for AWS. He excels at designing extensible, well-documented Java architectures, migrating legacy client-server systems to web services, and translating complex regulatory and analytical requirements into reliable production software. Based in Mesa, Arizona, he is pursuing how to bridge core financial-grade infrastructure practices with reproducible bioinformatics workflows to accelerate research in genomics, healthcare, and environmental science.
10 years of coding experience
2 years of employment as a software developer
Doctor of Philosophy - PhD, Bioinformatics, 4th Year, Doctor of Philosophy - PhD, Bioinformatics, 4th Year at University of North Carolina at CharlotteMaster’s Degree, Computer and Information Sciences, General, 3.89, Master’s Degree, Computer and Information Sciences, General, 3.89 at City University of New York-Brooklyn CollegeBachelor’s Degree, Mathematics and Computer Science, 3.03, Bachelor’s Degree, Mathematics and Computer Science, 3.03 at State University of New York College at Geneseo
English
Github Skills (12)
sequence-analysis10
taxonomy10
sequence10
metagenomics10
pipeline9
extensible9
bash8
java8
microbiome1
bam1
pathogen1
bioinformatics1
Programming languages (2)
Github contributions (5)
mikesioda/BioLockJ
Jan 2017 - May 2017
Contributions:297 pushes in 4 months
msioda/BioLockJ
Oct 2018 - Aug 2019
BioLockJ is an automated metagenomics pipeline for WGS/16s sequence analysis. The extensible Java framework writes/executes bash scripts to call external applications via BioModule interface. BioModules perform sequence processing, taxonomy assignment, univariate modelling, and report generation.
Contributions:75 commits, 76 PRs, 2 comments in 10 months
sequencemetagenomicsbash-scriptsunivariatesequence-analysis
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