Michele Berselli
Research Associate Bioinformatics
Cambridge, Massachusetts, United States
Summary
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Senior🎓
Top SchoolMichele Berselli is a bioinformatics research associate with eight years of experience building scalable genomics workflows and analysis software, currently contributing to Harvard Medical School’s 4DNuclome and Clinical Genome Analysis Platform teams. He specializes in developing cloud-native pipelines and tools—authoring open-source packages like granite for variant inheritance calling and magma for workflow management—that bridge algorithm design with production genomics processing. His background spans algorithm development for nucleic acid structure discovery during a PhD and machine learning–driven multi-omics integration from postdoctoral work, giving him a rare blend of computational rigor and biological insight. Based in Cambridge, he combines hands-on software engineering with a continual focus on statistics and ML to turn complex genomic data into actionable results.
8 years of coding experience
Bachelor's degree, Biological Sciences, 110/110 cum laude, Bachelor's degree, Biological Sciences, 110/110 cum laude at Università degli Studi di Modena e Reggio Emilia
Italian, English, French
Stackoverflow
1reputation
0reached
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Github Skills (27)
snakemake9
variants9
amazon9
bioinformatics9
wdl8
genomics8
aws8
aws-lambda8
meta8
conda7
docker7
shell6
pipeline6
portal5
aws-cloud4
Programming languages (9)
Github contributions (5)
dbmi-bgm/magma
Apr 2021 - Apr 2024
A collection of tools to manage meta-workflows automation
Contributions:11 releases, 18 reviews, 9 PRs in 3 years
metaautomationworkflowsworkflow
dbmi-bgm/cgap-pipeline-somatic-sentieon
Apr 2022 - Jul 2023
pipeline for somatic SNVs, INDELs, and SVs using Sentieon
Contributions:1 release, 4 reviews, 3 PRs in 1 year 4 months
indelspipelinesnvssvssomatic
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