Mohamed Abuelanin
Postdoctoral Researcher at University of California, Davis
Davis, California, United States
Summary
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Senior🎓
Top SchoolMohamed Abuelanin is a postdoctoral researcher and software-focused computational biologist with a PhD in Computer Science from UC Davis and a decade of experience building scalable research software. His work centers on creating efficient tools to transform and analyze rapidly expanding biological datasets, informed by graduate research in the Titus Brown lab and current work in the Dennis lab. He brings a rare blend of R&D and full-stack development experience from industry and academia, plus hands-on teaching and bioinformatics instruction. Based in Davis, CA, Mohamed combines rigorous engineering practices with domain knowledge in NGS and data-intensive biology to turn complex biological questions into reproducible, high-performance software.
9 years of coding experience
11 years of employment as a software developer
Doctor of Philosophy - PhD, Computer Science, 3.885, Doctor of Philosophy - PhD, Computer Science, 3.885 at University of California, DavisMaster of Science (MSc), Computer Science, Master of Science (MSc), Computer Science at Nile UniversityBachelor of Science (B.Sc.), Biomedical Engineering, Bachelor of Science (B.Sc.), Biomedical Engineering at Higher Technological Institute
English, Arabic
Github Skills (139)
unordered-set10
python10
package-management10
seq10
genomes10
genomics10
kallisto10
minhash10
unordered-map10
rna-seq10
sketching10
hash10
rust10
memory-footprint10
conda10
Programming languages (14)
Github contributions (5)
mr-eyes/genoFreq
Jul 2019 - Jul 2019
summarize and visualize the genotypes categories per sample in a VCF file
Contributions:53 commits, 1 PR, 49 pushes in 10 days
visualizesummarizegenotypesvcf
mr-eyes/duplicate_images_detector
Jul 2018 - Dec 2023
Detect duplicate images and view the distinct in a web app
Contributions:8 pushes, 2 comments, 1 issue in 5 years 6 months
duplicate-detectionflaskperceptual-hashingpython
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