Mouhamadou Ba
IR Fouille De Textes Et De Données Au Sein D'une Infrastructure De Recherche Bioinformatique
Paris, Ile-de-France
Summary
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Senior🎓
Top SchoolMouhamadou Ba is a research engineer with a decade of experience specializing in text and data mining for scientific literature, currently working on bioinformatics research infrastructure at INRAE. He contributes NLP and ML solutions to a large European project (OpenMinTeD) that integrates diverse text-mining services and platforms to democratize access to scientific content. His work focuses on agricultural and biodiversity applications, translating complex information extraction pipelines into reusable services for research communities. A PhD graduate from INSA Rennes, he blends academic rigor with hands-on engineering—authoring publications and maintaining related code (see github/mandiayba). Based in Paris, he has a track record of building workflow-driven data analysis tools and teaching experience that enhances his collaborative approach across multi-institution consortia.
10 years of coding experience
7 years of employment as a software developer
PhD in Computer Science, PhD in Computer Science at INSA Rennes - Institut National des Sciences Appliquées de RennesMaster 2 (M2), Master 2 (M2) at Université Gaston Berger de Saint-Louis
French, English
Github Skills (38)
sequencing9
bioinformatics9
genomics9
corpus8
extraction8
use-case8
pipeline7
science7
docker7
nlp6
specification6
biodiversity6
natural-language-processing6
java6
information-extraction5
Programming languages (5)
Github contributions (5)
openminted/uc-tdm-AS-E
Feb 2017 - May 2018
Contributions:28 commits, 2 PRs, 25 pushes in 1 year 3 months
plantextractionplant-developmentuse-caseinformation-extraction
openminted/alvisae
Sep 2017 - Mar 2020
Contributions:177 commits, 136 pushes, 1 branch in 2 years 5 months
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