Nathanael Fillmore
Deputy Director, Boston Informatics Group
Greater Boston United States
Summary
👤
Senior🎓
Top SchoolNathanael Fillmore is an Assistant Professor of Medicine at Harvard Medical School and Associate Director for Data Science at the VA Boston Healthcare System, bringing 13 years of experience applying machine learning and statistical methods to clinical, genomic, and imaging data. He leads a research group that translates VA-scale datasets into actionable improvements in patient care while also developing software and methodological infrastructure to make those analyses reproducible and scalable. His background—Ph.D. in Computer Science from the University of Wisconsin–Madison and a liberal arts BA in Philosophy and Classical Languages—reflects a blend of technical rigor and interdisciplinary thinking. Nathanael’s work sits at the intersection of biomedical research and production-grade data science, often tackling the practical challenges of integrating heterogeneous clinical data for real-world impact.
13 years of coding experience
3 years of employment as a software developer
Ph.D. Computer Science, Ph.D. Computer Science at University of Wisconsin-MadisonB.A. Philosophy and Classical Languages, B.A. Philosophy and Classical Languages at Carleton College
Stackoverflow
1reputation
0reached
0answers
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Github Skills (15)
rna-seq10
data-storage8
grids8
r7
compression6
clinical-trials6
large-scale6
scale4
dataframes4
serialization4
dataframe4
python4
harness2
machine-learning2
memory-efficient1
Programming languages (4)
Github contributions (5)
deweylab/detonate
Jan 2013 - Jun 2016
DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation
Contributions:206 commits, 9 pushes, 2 tags in 3 years 5 months
rna-seq
bostoninformatics/va_frailty_index
Mar 2021 - Dec 2021
Contributions:8 commits, 5 pushes, 1 branch in 8 months
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