Nicolas Bertin

Group Leader at A*STAR Genome Institute of Singapore (A*STAR GIS)

Singapore
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Summary

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Senior
🎓
Top School
Nicolas Bertin is a computational biology group leader based in Singapore with 13+ years applying advanced bioinformatics and functional genomics to cancer and precision medicine. He combines a PhD from Harvard/University of Montpellier with hands-on experience building large-scale NGS data platforms—ranging from real-time genome browsers to cloud-native GWAS and cohort analytics that cut multi-day jobs to hours. He has led multi-institution programmes (c-BIG) coordinating data acquisition, storage and analytics across partners and industry, and prior roles include architecting the HLI knowledgebase and the RIKEN ZENBU visualisation environment. Comfortable at the interface of wet lab assays and scalable computation, he repeatedly translates complex omics into actionable biological insights across genomics, epigenomics and proteomics. One less obvious strength is his track record of delivering both foundational tools (genome browsers, ETLs, pipelines) and operational programme leadership in multicultural, cross-continental teams.
code13 years of coding experience
job17 years of employment as a software developer
bookDoctor of Philosophy - PhD, systems biology, Doctor of Philosophy - PhD, systems biology at University of Montpellier
bookMagistère, Biology, Magistère, Biology at Université Côte d'Azur
bookDoctor of Philosophy - PhD, Biomathematics, Bioinformatics, and Computational Biology, Doctor of Philosophy - PhD, Biomathematics, Bioinformatics, and Computational Biology at Harvard Medical School
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Github Skills (10)

sequencing9
genome9
bioinformatics8
npm6
reference-implementation4
hail1
emr1
spark1
aws1
vep1

Programming languages (6)

DockerfileShellJavaScriptJupyter NotebookmupadPython

Github contributions (5)

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nicolas-bertin/zenbu-docker

Nov 2018 - Aug 2022

Contributions:34 pushes, 4 branches in 3 years 10 months
nicolas-bertin/GIS

Sep 2017 - Apr 2020

Contributions:3 pushes, 1 branch in 2 years 7 months
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Nicolas Bertin - Group Leader at A*STAR Genome Institute of Singapore (A*STAR GIS)