Nikita Kotlov

Sr. Director Data Analysis

Waltham, Massachusetts, United States
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Summary

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Senior
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Top School
Nikita Kotlov is a Sr. Director of Data Analysis and bioinformatics team lead with a decade of hands-on experience translating genomics data into clinical and research impact, currently steering multidisciplinary teams at BostonGene in Waltham. He combines deep expertise in cancer immunotherapy, lymphoma genetics and tumor microenvironment profiling with practical engineering skills—having built high-throughput pipeline engines, fusion-calling workflows, and QC/analysis tools for DNA/RNA sequencing. Nikita has managed teams of up to 20, overseen 50 projects, delivered clinical-reporting methods, and driven >14 publications and 25+ conference abstracts while also mentoring through 100+ hours of lectures. Notably, he patented an RNA expression ratio–based ML model for immunotherapy response prediction and routinely leverages public cohorts (TCGA, GTEx) to accelerate biomarker discovery. He is motivated by translating complex genomic signals into actionable targets and diagnostics, and by forging collaborations across academia and industry to advance personalized cancer treatment.
code10 years of coding experience
job7 years of employment as a software developer
bookKaspersky antivirus school
bookComputer Programming, 4,5, Computer Programming, 4,5 at Summer school of informatics
bookHigh School Diploma, Mathematics and Computer Science, 4.8, High School Diploma, Mathematics and Computer Science, 4.8 at AESC MSU — Kolmogorov Boarding School
bookLomonosov Moscow State University
languagesRussian, English, Japanese
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Github Skills (45)

docker-machine8
data-structures8
data-analysis8
multiarch8
python8
frame8
pandas8
manipulation8
data-science8
dataframes7
openflow7
rna-seq6
data-manipulation6
cox-regression6
genes6

Programming languages (7)

TypeScriptRCGoHTMLJupyter NotebookPython

Github contributions (5)

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avkitex/erd

Feb 2016 - Aug 2023

Contributions:7 pushes, 1 branch in 7 years 7 months
BostonGene/MFP

Sep 2020 - Jul 2021

Mollecular Functional Portraits
Contributions:25 commits, 15 pushes, 3 comments in 10 months
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Nikita Kotlov - Sr. Director Data Analysis