Nirupama Benis
Assistant Professor at Amsterdam UMC
Utrecht, Utrecht, Netherlands
Summary
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Senior🎓
Top SchoolNirupama Benis is an Assistant Professor and bioinformatics researcher with a decade of experience applying R, Python and semantic web technologies to make clinical and biological data FAIR. With a PhD in Bioinformatics and roles at Wageningen, AMC and Amsterdam UMC, she combines hands-on transcriptomics and -omics analysis with expertise in RDF/SPARQL-driven data interoperability. Her work focuses on FAIRification of clinical data, bridging computational methods, ontologies and database practice to enable reusable, machine-actionable datasets. Comfortable across RStudio, Spyder and Java tooling, she brings both academic rigor and practical engineering sensibilities to translational data problems. An early interest in corpus construction and biomedical engineering underpins a rare mix of data science, semantic modelling and domain knowledge in clinical research.
10 years of coding experience
6 years of employment as a software developer
Doctor of Philosophy (Ph.D.), Bioinformatics, Doctor of Philosophy (Ph.D.), Bioinformatics at Wageningen UniversityBachelor's, Biomedical engineering, Bachelor's, Biomedical engineering at Rajiv Gandhi College of Engineering and TechnologyMaster’s Degree, Biomedical engineering, Master’s Degree, Biomedical engineering at Linköping University
Github Skills (7)
semantic-web8
semantic7
data-model6
metadata3
email-address3
parser2
vignette2
Programming languages (2)
Github contributions (5)
nirupamaBenis/FAIRnessOmicsRepositories
Feb 2022 - Apr 2022
Contributions:2 releases, 2 pushes, 1 branch in 1 month
nirupamaBenis/ERN-common-data-elements
Jul 2021 - Jul 2021
Contributions:2 pushes in 1 day
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