Osvaldo Reis
Research Scientist at Evotec
Göttingen, Lower Saxony, Germany
Summary
👤
Senior🎓
Top SchoolOsvaldo Reis is a research scientist and bioinformatician with 11 years of experience blending computer engineering roots with applied genomics, transcriptomics and metagenomics. He designs and automates reproducible analysis pipelines using Bash/Linux, Python, Snakemake, R, Perl, Docker and Git, and has deployed workflows at scale on AWS. His decade-long tenure at Universidade Estadual de Campinas focused on genome and transcriptome assembly, functional and variant annotation, ribosome profiling analysis and microbiome metagenomics, and he now advances drug discovery research at Evotec. Comfortable moving between research and production, he brings pragmatic engineering discipline to complex biological data problems and an eye for reproducible, production-ready workflow design.
10 years of coding experience
13 years of employment as a software developer
Bachelor's degree, Computer Engineering, Bachelor's degree, Computer Engineering at Universidade Estadual de Ponta GrossaMaster of Science (M.Sc.), Genetics and Molecular Biology (Bioinformatics), Best graduate school in Genetics and Molecular Biology according to Capes, Master of Science (M.Sc.), Genetics and Molecular Biology (Bioinformatics), Best graduate school in Genetics and Molecular Biology according to Capes at Universidade Estadual de Campinas
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (24)
seq7
genome-annotation7
rna-seq6
comparative-genomics5
bioinformatics5
genomics5
python-bindings5
sequencing5
spanish5
orphan5
genome5
virus4
pipeline4
python4
searching3
Programming languages (6)
Github contributions (5)
osvaldoreisss/orpha-tools
May 2017 - Oct 2017
Contributions:2 PRs, 38 pushes, 2 branches in 5 months
drugssearch-engineorphandatabaserare
osvaldoreisss/hla-pipeline
Oct 2020 - Aug 2022
Contributions:7 pushes, 1 branch in 1 year 10 months
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