Paolo Inglese
Bioinformatician
Genoa, Liguria, Italy
Summary
👤
Senior🎓
Top SchoolPaolo Inglese is a bioinformatician with nine years of hands-on experience applying machine learning and statistical modelling to biomedical imaging and spatial omics, now based at the Istituto Italiano di Tecnologia in Genoa. He holds a PhD in Data Science from Imperial College London and has driven interdisciplinary projects across Imperial, the Francis Crick Institute and Queen Mary, focusing on unsupervised deep learning for mass spectrometry imaging, spatio-temporal neural models of cardiac ventricles, and transcriptomics time-course analysis. Paolo combines strong computational engineering (bash/AWS pipelines, HPC knowledge) with domain expertise in cancer and cardiac research, producing reproducible pipelines and novel methods such as spatially-aware feature selection for MSI. Colleagues rely on him to bridge experimental design and advanced analytics, and he has a track record of turning complex multi-modal data into biologically meaningful patient stratifications.
9 years of coding experience
5 years of employment as a software developer
Master II livello (2nd level University Master degree) Sviluppo e gestione di data center per il calcolo scientifico ad alte prestazioni, Master II livello (2nd level University Master degree) Sviluppo e gestione di data center per il calcolo scientifico ad alte prestazioni at Università degli Studi di BariDoctor of Philosophy - PhD Data Science, Doctor of Philosophy - PhD Data Science at Imperial College LondonMaster of Science - MS Computer Science with Artificial Intelligence, Master of Science - MS Computer Science with Artificial Intelligence at University of YorkSummer School: Scuola di Calcolo Scientifico con Matlab module 2 - parallel computing, Summer School: Scuola di Calcolo Scientifico con Matlab module 2 - parallel computing at Università degli Studi di Palermo
Italian, English
Github Skills (64)
genome10
projection10
dimensionality-reduction10
uniform10
topological-data-analysis10
genome-analysis10
genome-assembly10
approximation10
r-package9
visualization9
manifold9
mass-spectrometry9
bioinformatics9
genomics9
parser8
Programming languages (7)
Github contributions (5)
paoloinglese/SPUTNIK
Mar 2020 - Nov 2022
SPUTNIK R package
Contributions:30 commits, 3 PRs, 132 pushes in 2 years 8 months
r-packagesputnikmass-spectrometryrstatsbioinformatics
paoloinglese/DESI_MSI_recal
Aug 2021 - Jun 2024
Companion code for the publication: Inglese, P., Huang, H., Wu, V., Lewis, M.R. and Takats, Z., 2021. Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endogenous reference ions. biorXiv
Contributions:2 PRs, 55 pushes, 1 branch in 2 years 10 months
massrecalibrationhuangimaging-informaticscalibration-process
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