Patrick Mckenzie

Postdoctoral Fellow at Harvard University

New York, New York, United States
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Summary

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Patrick Mckenzie is a postdoctoral fellow at Harvard OEB specializing in the genomics of gene flow and speciation in flowering plants, with empirical work on Monarda, Phlox, and Pedicularis. He combines phylogenomics, bioinformatics, and methods development with demographic modeling to address systematics and speciation questions. Trained at Columbia (PhD) and the University of Tennessee (BS in EEB and Mathematics), he brings a strong quantitative foundation to evolutionary biology. Recently he has scaled natural history by integrating community-science big data and machine learning to map evolutionary patterns at landscape-to-continental scales. With a decade of research experience spanning field, lab, and computational work, he bridges classical systematics and modern genomics to tackle how species diverge and exchange genes.
code10 years of coding experience
job4 years of employment as a software developer
bookBachelor of Science (B.S.), Ecology and Evolutionary Biology; Mathematics, Summa Cum Laude, Bachelor of Science (B.S.), Ecology and Evolutionary Biology; Mathematics, Summa Cum Laude at University of Tennessee-Knoxville
bookDoctor of Philosophy - PhD, Evolutionary Biology, Doctor of Philosophy - PhD, Evolutionary Biology at Columbia University in the City of New York
bookSearcy High School
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Stackoverflow

Stats
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Github Skills (21)

phylogeny10
distributions9
tree9
python8
genetic8
migration8
forge8
bioinformatics8
simulation8
scenarios8
visualization6
matplotlib6
invariants5
conda-forge4
conda4

Programming languages (5)

RC++HTMLJupyter NotebookPython

Github contributions (5)

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pmckenz1/birdclips

Sep 2020 - Oct 2020

Contributions:5218 pushes, 1 branch in 1 month
pmckenz1/simcat

May 2019 - Mar 2025

invariants and machine learning
Contributions:217 pushes in 5 years 11 months
invariantsneural-networksmachine-learningdata-science
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Patrick Mckenzie - Postdoctoral Fellow at Harvard University