Paul Gugger

Senior Scientific Consultant at QIAGEN

New Jersey, United States
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Summary

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Senior
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Top School
Paul Gugger is a senior scientific consultant and bioinformatician with 11 years of experience applying multi-omics and population-genomic approaches to biomedical and ecological questions. He designs and implements pipelines for single-cell and bulk RNA-Seq, ChIP/ATAC-Seq and proteomic/lipidomic data, and has led collaborative projects totaling millions in funding while contributing to nearly 50 peer-reviewed publications. Comfortable at the intersection of academia and industry, he translates complex data into reproducible analyses, interactive Shiny tools, and actionable insights for research and clinical teams. He also maintains an active research profile in tree ecological genomics through the Ronin Institute, reflecting a rare blend of plant population genetics expertise and biomedical data science. Based in New Jersey, Paul pairs rigorous computational skill with mentoring and course development experience, making him effective at both technical leadership and training.
code11 years of coding experience
job8 years of employment as a software developer
bookBachelor of Science - BS, Biology, Bachelor of Science - BS, Biology at Duke University
bookDoctor of Philosophy - PhD, Ecology, Evolution and Behavior, Doctor of Philosophy - PhD, Ecology, Evolution and Behavior at University of Minnesota
languagesSpanish, English, Greek
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Stackoverflow

Stats
39reputation
4kreached
0answers
4questions
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Github Skills (25)

styles10
citations9
gene-expression9
creative-commons8
rna-seq8
infer8
bibliography8
seq8
css8
csl8
scenic8
r-package7
transcriptomics7
citation7
mv6

Programming languages (3)

CHTMLRuby

Github contributions (5)

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Contributions:35 commits, 25 pushes, 1 branch in 13 days
Contributions:4 pushes, 1 branch, 1 comment in 5 years 1 month
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Paul Gugger - Senior Scientific Consultant at QIAGEN