Paul Maragakis

Scientist at D. E. Shaw Research

New York, New York, United States
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Summary

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Rockstar
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Paul Maragakis is a scientist with 14 years of experience applying physics and computational methods to biological problems, currently using molecular simulation to reveal microscopic mechanisms of proteins at D. E. Shaw Research. His trajectory spans single-atom laser-atom interaction theory at Max Planck to many-body biochemical systems at Harvard, combining deep expertise in non-equilibrium thermodynamics, transition pathways, and MD simulation. Comfortable across dozens of programming languages and operating systems, he bridges theoretical physics, chemistry, and practical computational engineering to accelerate drug discovery. Trained under leaders like Martin Karplus and Tim Kaxiras, he brings rigorous theoretical intuition to large-scale, production-grade simulations. Based in New York, he’s driven by translating fundamental insights into technologies that can change the world, often tackling problems at scales few researchers straddle.
code14 years of coding experience
job6 years of employment as a software developer
bookBachelor of Science, Physics, Bachelor of Science, Physics at Aristoteleion Panepistimion Thessalonikis
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Github Skills (39)

pdf-files9
api-documentation8
zeal8
pdf8
polars7
devtools7
dataframe7
magit7
dataframes7
emacs7
api7
python7
threaded7
rust6
documentation6

Programming languages (8)

C++RustCJupyter NotebookRubyCudaEmacs LispPython

Github contributions (5)

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pjj/Emacs-nsh

Jul 2011 - Jan 2023

Contributions:29 commits, 22 pushes in 11 years 8 months
DEShawResearch/DESMILES

Jan 2022 - Sep 2022

Contributions:1 push in 7 months
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