Paul Pavlidis

Professor at University of British Columbia

Vancouver, British Columbia, Canada
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Summary

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Senior
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Paul Pavlidis is a Professor of Psychiatry at the University of British Columbia who applies two decades of bioinformatics and computational biology expertise to questions in neuroscience and translational psychiatry. Trained in Drosophila neurogenetics (PhD, UC Berkeley) and with postdoctoral experience in mammalian synaptic physiology at Stanford and Columbia, he bridges wet-lab neuroscience and large-scale gene expression and epigenetics analyses. He has led bioinformatics initiatives since joining UBC in 2006 and previously helped build computational biology programs at Columbia. A Michael Smith Foundation Career Scholar, he is known for integrating meta-analysis and genomics approaches to uncover molecular signatures of brain function and disease—bringing both experimental insight and informatics rigor to complex neurobiological problems.
code20 years of coding experience
job8 years of employment as a software developer
bookPhD, Molecular and Cell Biology, PhD, Molecular and Cell Biology at University of California, Berkeley
bookBA, Biological Sciences, BA, Biological Sciences at Cornell University
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Github Skills (51)

biodiversity10
bioinformatics10
genomics10
biology9
crossword9
symbolic-math9
sbml9
owl8
data-structures8
math-library8
statistics8
mathematics8
semantics8
factor8
ontologies8

Programming languages (8)

JavaRShellMakefileJavaScriptVueHTMLPython

Github contributions (5)

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PavlidisLab/baseCode

Mar 2006 - Jul 2022

Data structures, math and statistics tools, and utilities that are often needed across projects.
Contributions:841 commits, 52 pushes, 4 tags in 16 years 6 months
mathstatisticscrosswordmathematicssymbolic-math
PavlidisLab/ermineJ

Mar 2016 - Apr 2021

Contributions:47 pushes, 1 branch, 34 tags in 5 years 2 months
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Paul Pavlidis - Professor at University of British Columbia