Paweł Biernat

Staff AI Researcher at Ingenix.ai

Krakow, Lesser Poland Voivodeship
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Summary

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Senior
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Top School
Paweł Biernat is a Staff AI Researcher with 17 years of experience applying mathematics, physics and bioinformatics to clinical and biological problems across academia, R&D and client-facing roles. He builds and deploys robust ML systems—from Bayesian and classical models for small, high-dimensional clinical cohorts to deep learning and generative models for proteins and sequencing data—backed by strong production practices (Docker, Kubernetes, DVC, MLflow). Paweł has led interdisciplinary teams and authored company-wide ML packages, combining hands-on model development (NumPyro, JAX, PyTorch, Hugging Face, AlphaFold2) with rigorous model verification and tailored cross-validation. He’s comfortable moving projects from exploratory research to large-scale pipelines and deployment, and has a PhD in Mathematics that informs his emphasis on principled, reproducible methods. A less obvious strength is his track record of integrating formal numerical and probabilistic techniques (variational inference, MCMC, differential-equation methods) into practical bioinformatics tools used in production.
code17 years of coding experience
job11 years of employment as a software developer
bookDoctor of Philosophy (Ph.D.) Mathematics, Doctor of Philosophy (Ph.D.) Mathematics at Jagiellonian University
languagesEnglish, Polish, German
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Github Skills (198)

programming-language10
dataflow10
python10
complex-numbers10
mcmc10
automation10
infrastructure10
transcriptomics10
orchestration10
bayesian-inference10
prefect10
scikit10
statistics10
julialang10
interval-arithmetic10

Programming languages (9)

JuliaDockerfileShellRCHTMLJupyter NotebookPython

Github contributions (5)

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JuliaODE/ODE.jl

Oct 2015 - Sep 2016

Assorted basic Ordinary Differential Equation solvers
Contributions:133 commits, 16 PRs, 103 pushes in 11 months
equationdifferentialequationsordinary-differential-equationsddesolvers
pwl/fpde

Apr 2011 - Nov 2011

Contributions:175 commits, 3 issues in 6 months
fortranpdepde-solversolver
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Paweł Biernat - Staff AI Researcher at Ingenix.ai