Pierre Larmande

Directeur De Recherche (DR2) at IRD

Montpellier, Occitania, France
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Summary

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Senior
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Pierre Larmande is a senior research scientist and Directeur de Recherche (DR2) at IRD with over a decade of experience specializing in data integration, the Semantic Web, and knowledge management for plant genomics. He has led multidisciplinary teams and labs across France and Vietnam, driving multi-scale integration of genomic, NGS and high-throughput phenotyping data for rice and other crops. His work bridges computational biology and applied research—combining ontology engineering, semantic data linking and big data architectures—to support regional partnerships with institutions like USTH, IRRI and ICAR. Holder of an HDR and a PhD in Informatics, he is known for turning complex biological datasets into interoperable knowledge resources and for embedding semantic approaches into real-world plant science platforms. Notably, he has maintained long-term leadership of data integration groups and contributed to national research infrastructures such as the South Green Platform.
code10 years of coding experience
job23 years of employment as a software developer
bookHabilitation à diriger des recherches (HDR), Informatics, Habilitation à diriger des recherches (HDR), Informatics at Université de Montpellier
languagesFrench, English, Spanish, Portuguese
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Stackoverflow

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1question
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Github Skills (49)

ontologies9
semantics9
exploit9
owl9
rdf8
geneontology8
semantic-web8
ontology8
linked-data8
skos8
portal8
bioinformatics8
linked-open-data8
bioinformatics-analysis8
api7

Programming languages (8)

JavaRCSSCTeXJavaScriptJupyter NotebookPython

Github contributions (5)

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pierrelarmande/OryzaGP

Dec 2020 - Nov 2022

Contributions:56 commits, 55 pushes, 1 branch in 1 year 11 months
ETL for RDF data lifting for the AgroLD project. Python packages for GFF, VCF, GAF and specific plant databases.
Contributions:4 PRs, 284 pushes, 6 branches in 5 years 7 months
liftingplantpythonlinked-datagaf
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Pierre Larmande - Directeur De Recherche (DR2) at IRD