Pierre-olivier Quirion

ARC HPC Specialist at Canadian Centre for Computational Genomics

Montreal, Quebec, Canada
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Summary

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Senior
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Pierre-Olivier Quirion is an ARC/HPC specialist and lead developer with 11+ years of hands-on experience building high-performance computing and cloud architectures for research domains including genomics, neuroimaging, astrophysics and CGI. With a PhD in astrophysics and a background managing MRI hardware/software, he blends deep numerical-simulation and signal-processing expertise (C/Fortran/Python) with practical Linux and distributed-systems skills. He currently supports computational genomics at McGill and Calcul Québec while contributing to open-source neuroimaging tooling such as nilearn, where he enhanced image resampling and plotting functionality. His career spans academia, government, and industry—designing pipelines for large optical systems and CCD data as well as clusters for animation rendering—so he’s as comfortable profiling MPI jobs as he is tuning multimedia production pipelines. Known for organizing national conferences and delivering international seminars, he pairs rigorous research instincts with effective communication and a pragmatic, solution-first engineering style.
code11 years of coding experience
job6 years of employment as a software developer
bookPh.D. Astrophysics, Stellar physics, Ph.D. Astrophysics, Stellar physics at Université de Montréal
bookLicence, Physics, Licence, Physics at Université Joseph Fourier (Grenoble I)
languagesEnglish, French
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Stackoverflow

Stats
594reputation
171kreached
6answers
1question
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Github Skills (21)

python10
image-processing10
brain-imaging10
scikit10
machine-learning10
neuroimaging10
scikit-learn10
mri10
visualization9
numpy9
visualizations9
pyqt9
testing8
openstack6
dockerfile6

Programming languages (17)

SmartyC++CCMakeGoNextflowPerlGroovy

Github contributions (5)

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nilearn/nilearn

Nov 2017 - Nov 2017

Machine learning for NeuroImaging in Python
Role in this project:
userML Engineer
Contributions:5 commits, 2 PRs, 2 comments in 1 day
Contributions summary:Pierre-olivier contributed to the `nilearn` library by adding new functionality to image resampling functions, specifically the `clip` option to handle image value ranges. They implemented tests to validate the new clip functionality. Additionally, the user added new views to the `plot_surf_*` functions and integrated example code to showcase the use of these new views.
neuroimagingpythondecodingbrain-connectivitymachine-learning
c3g/auspice

Apr 2020 - Jan 2022

Web app for visualizing pathogen evolution
Contributions:12 PRs, 48 pushes, 41 branches in 1 year 8 months
pathogenreactevolutionvisualizingvisualization
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Pierre-olivier Quirion - ARC HPC Specialist at Canadian Centre for Computational Genomics