Pierrick Roger
Research Engineer & Software Architect at CEA
Cicciano, Campania, Italy
Summary
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Rockstar🎓
Top SchoolPierrick Roger is a research engineer and software architect with 12+ years of experience building scientific and production-grade software across bioinformatics, metabolomics, energy simulation and embedded systems. At CEA/CNRGH he supports researchers by designing architectures, implementing tools (R/Bioconductor, Galaxy) and containerized workflows (Docker, Jenkins) for large-scale genomics and metabolomics projects. His background spans low-level C/C++ and embedded work to high-level Python/R and web stacks (PHP, MySQL, MongoDB), enabling him to bridge algorithms, data engineering and deployable platforms. He has led cross-disciplinary teams, supervised engineers and clinicians, and translated research needs into robust, versioned software and CI-driven deployments. Notably, he contributed spectral matching and unknown-molecule identification algorithms for national metabolomics infrastructure and built interoperable tools used in EU projects like PhenoMeNal and MetaboHUB. Trained as an engineer in both physical sciences and computer science, he combines domain fluency with long-standing expertise in UNIX/HPC and virtualization.
12 years of coding experience
13 years of employment as a software developer
Mathematics and sciences, Preparatory classes T' for French engineering schools (Grande Écoles)., Mathematics and sciences, Preparatory classes T' for French engineering schools (Grande Écoles). at Lycée Joliot-Curie - RennesEngineer diploma (Master II), Physics, chemistry and biology, Master II / Grande École (engineering school), Engineer diploma (Master II), Physics, chemistry and biology, Master II / Grande École (engineering school) at ESPCI ParisTechEngineer Diploma (Master II), Computer science, and automation, Master II / Grande École (engineering school), Engineer Diploma (Master II), Computer science, and automation, Master II / Grande École (engineering school) at ISIA / Mines ParisTechMathematics and sciences, Preperatory classes T' for French engineering schools (Grandes Écoles)., Mathematics and sciences, Preperatory classes T' for French engineering schools (Grandes Écoles). at Lycée Déodat de Séverac - ToulouseHigh school diploma in sciences, Mathematics and sciences., High School, High school diploma in sciences, Mathematics and sciences., High School at Lycée Léonce Vieljeux - La Rochelle
English, French, Italian
Stackoverflow
26reputation
13kreached
2answers
0questions
Github Skills (125)
package-management10
python10
command-line-interface10
databases10
datasets10
rcpp10
genomics10
r10
argparse10
chemistry10
command-line-parser10
cheminformatics10
pipeline10
galaxy10
science10
Programming languages (14)
Github contributions (5)
workflow4metabolomics/isa2w4m
Nov 2017 - Apr 2022
Contributions:50 commits, 6 PRs, 49 pushes in 4 years 6 months
pkrog/biodbUniprot
Mar 2020 - Sep 2022
biodb connector to Uniprot (https://www.uniprot.org/) database.
Contributions:60 commits, 19 PRs, 41 pushes in 2 years 6 months
connectordatabaseuniprot
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