Pinar Demetci

Schmidt Center Postdoctoral Fellow at Broad Institute of MIT and Harvard

Cambridge, Massachusetts, United States
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Summary

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Senior
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Pinar Demetci is a computational biology researcher and Schmidt Center Postdoctoral Fellow at the Broad Institute and MIT, specializing in probabilistic and statistical algorithms for single-cell multi-omics integration. With 11 years of research and engineering experience spanning PhD work at Brown and internships at Microsoft, she develops methods using optimal transport, MMD, and manifold alignment to tackle disproportionate cell-type representation and noisy high-dimensional biomedical data. Her work blends rigorous theory with practical pipelines—evidenced by multiple publications and contributions like SCOT—that aim to advance genomics for precision medicine. Based in Cambridge, she seeks research-heavy roles where she can continue translating cutting-edge machine learning into tools for real-world biological discovery.
code11 years of coding experience
job9 years of employment as a software developer
bookDoctor of Philosophy - PhD Computer Science Computational Biology, Doctor of Philosophy - PhD Computer Science Computational Biology at Brown University
bookBachelor of Science - BS Engineering (Bioengineering concentration), Bachelor of Science - BS Engineering (Bioengineering concentration) at Franklin W. Olin College of Engineering
bookHigh School Diploma Turkish High School Diploma (Science/Math Track) & International Baccalaureate (IB), High School Diploma Turkish High School Diploma (Science/Math Track) & International Baccalaureate (IB) at TEV Inanc Turkes High School
languagesTurkish, English, French
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Stackoverflow

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17reputation
55reached
0answers
1question
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Github Skills (26)

transport10
ranking9
bioinformatics9
react8
science8
computer-science7
python6
assistive5
assistive-technology4
pacman3
nextjs3
prototyping3
typescript3
math2
machine-learning2

Programming languages (3)

HTMLJupyter NotebookPython

Github contributions (5)

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pinardemetci/3DScanner

Sep 2015 - Dec 2020

Contributions:4 pushes, 2 branches in 5 years 3 months
rsinghlab/SCOT

Apr 2020 - Jan 2022

Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data
Contributions:1 release, 98 commits, 6 PRs in 1 year 9 months
multi-omicswassersteinmulti-omics-dataomicsbioinformatics
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Pinar Demetci - Schmidt Center Postdoctoral Fellow at Broad Institute of MIT and Harvard