Prashant Singh
Senior Research Associate - CryoEM
Amsterdam, North Holland, United States
Summary
👤
Senior🎓
Top SchoolPrashant Singh is a structural biologist and computational scientist with over 16 years in cryo-EM and more than nine years in advanced research roles at Vanderbilt University, where he now serves as Senior Research Associate. He combines hands-on expertise in sample prep and data collection with deep computational skills using RELION, CryoSPARC, TOPAZ, AlphaFold and molecular modeling tools to refine atomic models from cryo-EM and X-ray maps. His projects span bioenergetics, cell signaling and viral pathogens (Ebola, COVID-19, HIV), and he translates complex structural data into publishable visuals using Blender, Chimera and PyMOL. A pragmatic lab leader and mentor, he manages projects, supervises teams, and contributes to grant writing and scientific communication. He also co-founded PurSolutions to commercialize high-quality cytoskeletal protein reagents, reflecting an entrepreneurial streak bridging academia and biotech. Based in Amsterdam, he pairs curiosity-driven single-cell and multiomics computation with practical structural solutions that accelerate drug discovery.
9 years of coding experience
14 years of employment as a software developer
MS, Biotechnology, MS, Biotechnology at Middle Tennessee State University (MTSU)
Github Skills (35)
phyloseq9
genomics8
cran8
seurat8
sequencing8
bioinformatics8
single-cell-genomics7
bioconductor7
microbiome6
differential-expression5
r-package5
taxonomy5
weighted4
single-cell-analysis4
gene-expression4
Programming languages (2)
Github contributions (5)
PrashINRA/BootStrap_SingleCell
Aug 2021 - Jan 2022
Contributions:23 commits, 22 pushes, 1 branch in 4 months
PrashINRA/MetaData_GrapevinePhyllo
Mar 2018 - Oct 2021
Contributions:6 pushes, 1 branch in 3 years 7 months
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