Raik Otto
Data Engineer
Berlin Metropolitan Area Germany
Summary
👤
Senior🎓
Top SchoolRaik Otto is a Data Engineer and bioinformatician with 10 years of experience applying machine learning and large-scale data engineering to medical and life-sciences problems. He holds a Ph.D. in Bioinformatics (Magna Cum Laude) and has built production-grade NGS and multi-omics analysis pipelines on HPC platforms for academic groups and industry. Currently at IQTIG he focuses on engineering reproducible analysis workflows with a strong emphasis on medical statistics and quality assurance. His background spans predictive modeling for rare cancers, coordination of research teams, and development of automation that converts noisy heterogeneous biomedical data into robust features for ML. Notably, his work combines hands-on pipeline development with principled statistical practice—bridging research-grade methods and operational data engineering. Based in Berlin, he brings an uncommon blend of deep domain expertise in oncology genomics and practical production experience.
10 years of coding experience
3 years of employment as a software developer
Glasgow UniversityBachelor of Science (BSc), Bioinformatics, 2.7, Bachelor of Science (BSc), Bioinformatics, 2.7 at Freie Universität BerlinPh.D., Bioinformatics, Magna Cum Laude, Ph.D., Bioinformatics, Magna Cum Laude at Humboldt University of Berlin
German, English, French, Polish
Github Skills (7)
bioconductor2
bioinformatics2
machine-learning1
deep-learning1
measurements1
tensorflow1
sequence1
Programming languages (2)
Github contributions (5)
RaikOtto/Koop_Klinghammer
Aug 2018 - Aug 2022
Contributions:50 pushes in 4 years
RaikOtto/Deko_Projekt
Apr 2018 - Feb 2022
Contributions:219 pushes, 1 branch in 3 years 9 months
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