Ramon Massoni-badosa

PHD Candidate

New York, New York, United States
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Summary

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Senior
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Top School
Ramon Massoni-Badosa is a cancer-focused computational biologist and PhD candidate turned postdoctoral researcher with eight years of experience developing and applying single-cell and multiomic genomics to study cancer evolution, including clonal dynamics in CLL and Richter's transformation. Trained in human biology and bioinformatics (two master's degrees and a PhD, Cum Laude), he blends deep wet-lab internships across genetics, epigenetics and pharmacology with production-grade bioinformatics and project leadership at institutions like CNAG-CRG, Weill Cornell Medicine and the New York Genome Center. He has led a large-scale Human Cell Atlas project, contributed technical innovations in single-cell genomics, and teaches algorithmic foundations to bioinformatics students. Colleagues recognize him for strong communication and project management skills that amplify his technical impact. A lesser-known strength is his deliberate cross-training—seeking diverse lab internships early on—that gives him an unusually broad experimental perspective for a computational scientist.
code8 years of coding experience
bookDoctor of Philosophy - PhD, Biomedicine, Cum Laude, Doctor of Philosophy - PhD, Biomedicine, Cum Laude at Universitat Pompeu Fabra
languagesCatalan, Spanish, English
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Github Skills (100)

seurat10
transcriptomics10
genomics10
single-cell-analysis10
single-cell-genomics10
bioinformatics10
cran10
variational-autoencoder9
seq9
gene-expression9
tsne9
scanpy9
rna-seq8
python8
spatial-transcriptomics8

Programming languages (7)

JavaRTeXJavaScriptHTMLJupyter NotebookPython

Github contributions (5)

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massonix/sampling_artifacts

Dec 2019 - Nov 2022

Contributions:58 commits, 54 pushes, 1 branch in 2 years 11 months
massonix/HCATonsilData

Mar 2022 - Jun 2022

Provide programmatic access to the tonsil cell atlas datasets
Contributions:3 reviews, 38 commits, 21 PRs in 3 months
datasetsprogrammaticatlas
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