Rebecca Kirsch
Proteomics Data Specialist
Greater Odense Area Denmark
Summary
👤
Senior🎓
Top SchoolRebecca Kirsch is a proteomics-focused bioinformatician with 10 years of experience building reproducible data pipelines, QC tooling, and apps for mass spectrometry and protein interaction resources. She has moved between academic and infrastructure roles—helping migrate and document production data resources at SIB/University of Zurich and co-developing the STRING database and multiple weekly-updated proteomics resources at the Novo Nordisk Foundation Center for Protein Research. Rebecca pairs a PhD in molecular biology/bioinformatics with hands-on ETL, pipeline automation, and mentoring/teaching experience, making complex datasets accessible to collaborators. Based in the Greater Odense Area, she now develops automated workflows and QC systems at the Proteomics Research Infrastructure, with a practical focus on maintainability and onboarding—often finishing others’ pipelines so teams can run them reliably in production.
9 years of coding experience
7 years of employment as a software developer
Master’s Degree, Biology, Master’s Degree, Biology at University of LeipzigDoctor of Philosophy (Ph.D.), Molecular Biology, Bioinformatics, Doctor of Philosophy (Ph.D.), Molecular Biology, Bioinformatics at University of Copenhagen
German, English, Danish
Github Skills (26)
crosstalk10
visualize8
visualization8
cellular-network7
computational-biology7
bioinformatics6
genome6
minhash6
bam6
genomics5
electrophysiology5
biology5
bedtools5
shotgun4
mass-spectrometry4
Programming languages (6)
Github contributions (5)
veitveit/CrossTalkMapper
Oct 2019 - May 2021
R scripts to create crosstalk maps that visualize multi-layered proteoform data
Contributions:35 commits, 9 pushes, 1 branch in 1 year 8 months
visualizationvisualizerstatsr-scriptscrosstalk
rebki/git-course-recipies
Feb 2022 - Feb 2022
Contributions:4 pushes, 2 branches in 1 day
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