Rodrigo聽Santibanez-palominos

Assistant Project Scientist at UC San Diego

San Diego, California, United States
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Summary

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Senior
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Rodrigo Santibanez-palominos is an assistant project scientist and computational biologist with nine years of experience modeling complex biological and biochemical systems and developing metabolic modeling software. He holds a PhD in Engineering Sciences (Computational Biology) from Pontificia Universidad Cat贸lica de Chile and trained in molecular biotechnology at Universidad de Chile, combining wet鈥憀ab understanding with strong computational and systems-administration skills. At UC San Diego he progressed from postdoctoral work in the Zengler Lab to his current faculty-affiliated role, focusing on building reproducible tools for microbial systems analysis. A GitHub and synthetic biology enthusiast, he bridges research and software engineering to turn mechanistic models into usable code, often working on end-to-end pipelines that few biologists develop themselves. Based in San Diego, he brings a pragmatic, interdisciplinary approach that accelerates translational microbiome and metabolic research.
code9 years of coding experience
job2 years of employment as a software developer
bookDoctorate Engineering Sciences Computational Biology, Doctorate Engineering Sciences Computational Biology at Pontificia Universidad Cat贸lica de Chile
bookMolecular Biotechnology Engineering Biotechnology, Molecular Biotechnology Engineering Biotechnology at Universidad de Chile
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Github Skills (89)

kappa10
systems-biology9
notebook9
ipython9
statistics8
python8
calibration8
matplotlib8
rule8
biology8
jupyter8
pandas7
prediction7
rule-based7
data-visualization7

Programming languages (10)

RCSSC++OCamlJavaScriptLuaPerlJupyter Notebook

Github contributions (5)

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glucksfall/pleione

Apr 2018 - Jan 2020

Calibration of Rule-Based Models
Contributions:1 release, 183 commits, 2 PRs in 1 year 8 months
calibrationrule-basedrule
glucksfall/pleiades

Dec 2017 - Oct 2020

Contributions:1 PR, 14 pushes, 1 branch in 2 years 10 months
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Rodrigo Santibanez-palominos - Assistant Project Scientist at UC San Diego