Roger Tu - Senior Data Scientist

Roger Tu

Senior Data Scientist

San Diego, California, United States

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Summary

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Senior

🎓

Top School

Roger Tu is a Senior Data Scientist in San Diego with seven years of experience applying deep learning, graph neural networks and biomedical knowledge graphs to biomarker discovery and drug repurposing. He holds a PhD in Computational Biology & Bioinformatics from Scripps Research and has moved research-grade graph and ML methods into industry roles at Rancho BioSciences. Roger combines hands-on skills in data engineering (polars/pandas), FAIR data harmonization, and model fine-tuning of LLMs and GNNs to produce explainable predictions for new therapeutic uses of existing drugs. His background in upstream bioprocess development and early work on cost-saving stem cell culture methods gives him an uncommon cross-disciplinary perspective bridging wet lab constraints and computational discovery.

8 years of coding experience

13 years of employment as a software developer

Mark Keppel High School

Doctor of Philosophy - PhD, Computational Biology and Bioinformatics, Doctor of Philosophy - PhD, Computational Biology and Bioinformatics at Scripps Research

University of California, Irvine

Chinese, English

Github Skills (32)

uri8

graph8

bioinformatics8

serializer8

sparql7

linked-data7

semantic-web7

deep-learning7

pypi7

python7

parser7

rdf7

json-ld6

rdflib6

ntriples5

Programming languages (4)

JavaScriptHTMLJupyter NotebookPython

Github contributions (5)

SuLab/MechRepoNet

Aug 2021 - Apr 2022

Contributions:17 commits, 14 pushes in 7 months

turoger/hs_interns

Jan 2021 - Dec 2023

Contributions:4 PRs, 4 pushes in 2 years 11 months

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