Romain Fernandez
Researcher - Image Analysis at CIRAD
Greater Montpellier Metropolitan Area France
Summary
👤
Senior🎓
Top SchoolRomain Fernandez is a researcher and software engineer with 19 years' experience designing image analysis solutions for agronomy and biomedical applications, currently focused on agroecological transitions at CIRAD. He combines a PhD in informatics and hands-on engineering to build multimodal 3D pipelines—registration, segmentation and visualization—for plant and life-science problems, with first-author publications in high-impact journals like Nature Methods and Bioinformatics. Comfortable moving between research and production, he has reduced complex biological imaging challenges to practical tools deployed for Southern countries and viticulture disease tracking. His background in signal processing, machine learning coursework (Stanford/Coursera) and project-management certification enables him to bridge academic rigor with operational delivery. An often-overlooked strength is his long experience in pedagogy and stakeholder advocacy from leading national scout training programs, which sharpens his skill at translating technical solutions for diverse users.
19 years of coding experience
3 years of employment as a software developer
Machine Learning, Computer Science, Machine Learning, Computer Science at Stanford university on courseraPhd in Informatics, Phd in Informatics at Université de MontpellierCertification, Project management, Certification, Project management at Ecole centrale de LilleMaster of Engineering (M.Eng.), Digital Signal Processing, Master of Engineering (M.Eng.), Digital Signal Processing at Polytech'Nice-Sophia
Github Skills (54)
spin10
imagej10
raycasting10
stereo10
modeling10
mri10
image-processing9
echo9
java9
dimensions9
image-analysis8
reproducible-research8
journal7
open-science7
itk7
Programming languages (6)
Github contributions (5)
Rocsg/FijiRelax
Mar 2020 - Jan 2023
FijiRelax: 3D+t multi-echo spin-echo sequences MRI analysis
Contributions:7 releases, 3 reviews, 237 commits in 2 years 11 months
imagej-pluginsstereoimagejmrimulti-echo
Rocsg/RootSystemTracker
Oct 2021 - Feb 2023
Contributions:1 release, 4 reviews, 20 commits in 1 year 4 months
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