Saad Raza

Postdoctoral Researcher at University of Delaware

Newark, Delaware, United States
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Summary

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Senior
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Top School
Saad Raza is a Postdoctoral Researcher and product development specialist with a decade of experience applying molecular modeling, molecular dynamics, and programming to solve pharmaceutical and biological problems. He holds a PhD in Bioinformatics and has led complex simulations—from replica exchange umbrella sampling of phytochemical and bacterial microcompartment permeability to free energy calculations with BFEE2 and FEP—demonstrating both methodological depth and practical insight into biomolecular transport. Saad has bridged academic research and industry product work, debugging and optimizing SILCSBIO pipelines and developing force field parameters for challenging chemistries like boron-containing compounds. He also maintains HPC/GPU clusters and mentors junior researchers, reflecting strong computational infrastructure and team leadership skills. Based in Newark, Delaware, Saad combines hands-on simulation expertise with product-minded rigor, and has an unusual track record of scaling simulations (from 0.21M to 9.8M atom equivalents) to probe real-world biological questions.
code10 years of coding experience
job6 years of employment as a software developer
bookDoctor of Philosophy - PhD Bioinformatics, Doctor of Philosophy - PhD Bioinformatics at Quaid-i-Azam University, Islamabad
bookBachelor's degree Bioinformatics, Bachelor's degree Bioinformatics at COMSATS University Islamabad
languagesEnglish
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Github Skills (11)

computational-biology5
binder4
molecular-simulation3
jupyter2
bioinformatics2
jupyter-widget2
ipywidgets2
simulations1
simulation1
protocols1
enzyme1

Programming languages (1)

Jupyter Notebook

Github contributions (4)

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saadraza128/CHEWD

Sep 2018 - Mar 2019

Contributions:27 commits, 22 pushes, 1 branch in 6 months
saadraza128/enzlig_tools

Apr 2016 - Apr 2016

Contributions:5 pushes in 1 day
enzymesimulationssimulationatomistic-simulationsbioinformatics
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Saad Raza - Postdoctoral Researcher at University of Delaware