Salvatore Cosentino
Research Associate
Kashiwa, Japan
Summary
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Rockstar🎓
Top SchoolSalvatore Cosentino is a bioinformatics researcher and machine learning practitioner with nine years of experience applying AI to genomic and metagenomic problems across Europe and Japan. He holds a PhD from DTU where he developed WGS-based predictive tools for bacterial species, subtyping and antibiotic resistance that are still hosted at the Center for Genomic Epidemiology. His work spans metagenomics, transcriptomics and clinical genomics, and produced fast, accurate tools such as SonicParanoid for ortholog inference. He has industry experience building speech recognition models for automotive navigation and a track record of turning method development into practical web services and analysis pipelines. Based in Kashiwa, he combines deep computational skills (R, Python, C++) with a practical focus on reproducible tools used by collaborating labs across Japan. Outside the lab he pursues languages, photography and cooking, reflecting a pragmatic curiosity that informs both collaborative science and tool-building.
9 years of coding experience
Doctor of Philosophy (Ph.D.), Biotechnology, Doctor of Philosophy (Ph.D.), Biotechnology at Danmarks Tekniske UniversitetMaster of Science, Bioinformatics, Master of Science, Bioinformatics at Università degli Studi di TrentoBachelor of Science - BS, Bachelor of Science - BS at Università di Catania
Italian, English, Japanese, Danish, sicilian, Spanish
Stackoverflow
6,880reputation
1.8mreached
10answers
8questions
seaborn
top-1%
pandas
top-1%
python
top-5%
Github Skills (150)
blast10
taxonomy10
package-management10
pls10
kdeconnect10
syncthing10
seaborn10
pandas10
m3u10
vod10
bioconda10
conda10
gjs10
gnome10
metagenomics10
Programming languages (10)
Github contributions (5)
salvoc81/IPTV
Aug 2021 - May 2023
M3U Playlist for free TV channels
Contributions:8 PRs, 13 pushes, 8 branches in 1 year 9 months
m3um3u-playlistchannelsiptvplaylist
salvoc81/bioconda-recipes
Oct 2018 - Nov 2021
Conda recipes for the bioconda channel.
Contributions:43 pushes, 9 branches in 3 years 1 month
biocondabioinformaticsrecipesconda
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