Samuel Clamons

Bioinformatic Scientist

San Diego, California, United States
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Summary

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Senior
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Top School
Samuel Clamons is a bioinformatic scientist with 11 years of cross-disciplinary experience combining synthetic biology, mathematical modeling, and data-driven software engineering. He holds a PhD in Bioengineering from Caltech, where he developed CRISPRi circuit models, built lab automation and analysis software for liquid handlers and plate readers, and released a widely used cloning toolkit on Addgene. Currently at Illumina, he applies population genomics and computational support to R&D products, bringing both wet‑lab insight and production-ready code. An active contributor to open-source testing infrastructure, he has strengthened the Hypothesis property-based testing suite by improving tests for edge cases like non-finite numeric values. Comfortable across Linux, Windows, and macOS environments, he bridges experimental design and reproducible computational pipelines to accelerate biological discovery and impact human health.
code11 years of coding experience
job8 years of employment as a software developer
bookBS, Mathematics, BS, Mathematics at The College of William and Mary
bookCalifornia Institute of Technology
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Github Skills (5)

property-based-testing10
pytest10
python10
testing10
fuzzing9

Programming languages (7)

C++RustCPerlGroovyJupyter NotebookPython

Github contributions (5)

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HypothesisWorks/hypothesis

Jul 2022 - Jul 2022

Hypothesis is a powerful, flexible, and easy to use library for property-based testing.
Role in this project:
userQA Engineer / Test Automation Engineer
Contributions:1 review, 8 commits, 5 PRs in 1 day
Contributions summary:Samuel's commits primarily involve enhancing the test suite for the Hypothesis library. They added tests for filter rewriting, particularly focusing on non-finite values for floats and integers. The contributions also included fixing existing filter rewriting tests and general improvements to testing infrastructure and code.
property-based-testingpythonincrementaltestingfuzzing
sclamons/murraylab_tools

Nov 2016 - Dec 2020

Functions for building Echo picklists and directions for setting up source plates for the Echo. Mostly intended for setting up TX-TL experiments.
Contributions:1 release, 515 commits, 15 PRs in 4 years 1 month
platesdirectionsechosetting
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Samuel Clamons - Bioinformatic Scientist