Sander Bollen

Solutions Architect at Clockworks

The Hague, South Holland, Netherlands
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Summary

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Sander Bollen is a Senior Software Engineer with 11 years of experience building data-driven systems and production pipelines, currently based in The Hague. He has bridged bioinformatics and software engineering—starting with genomics research and evolving into architecting data lakes, Airflow pipelines, and backend services in Python, Postgres and cloud-native AWS environments. At OKRA.ai he led migrations from AWS Glue to custom Airflow clusters, supported Spark workloads, introduced alerting and coached junior engineers, then moved into a senior engineering role at Clockworks. Comfortable across the stack, he combines DevOps expertise (Kubernetes, Terraform, CI/CD) with hands-on development in Rust, Go, Scala and frontend JavaScript/TypeScript. He’s known for turning complex scientific and geospatial requirements into pragmatic, maintainable systems and for mentoring teams to adopt containerization and best practices. His background in computational biology gives him a distinctive edge when solving data quality and pipeline robustness challenges.
code11 years of coding experience
job11 years of employment as a software developer
bookMaster of Science (MSc) Cancer Genomics & Developmental Biology, Master of Science (MSc) Cancer Genomics & Developmental Biology at Utrecht University
bookPorta Mosana
bookBachelor of Applied Science (BASc) Biomedical Sciences, Bachelor of Applied Science (BASc) Biomedical Sciences at Zuyd University of Applied Sciences
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Stackoverflow

Stats
730reputation
112kreached
10answers
0questions
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Github Skills (150)

package-management10
gatk10
conda10
cromwell10
bioinformatics10
githubactions9
singularity9
nextflow9
gradient-boosting9
pipeline9
yaml9
bioconda9
testing9
snakemake9
deep-learning9

Programming languages (13)

JavaCRustScalaGoJupyter NotebookTypeScriptDockerfile

Github contributions (5)

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sndrtj/fastq-count

Nov 2017 - May 2019

Contributions:1 release, 13 commits, 12 pushes in 1 year 5 months
sndrtj/afplot

Aug 2016 - Jun 2019

Contributions:33 commits, 32 pushes, 3 branches in 2 years 9 months
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