Sanjay Srikakulam
Scientific Researcher (Postdoc) at Forschungszentrum Jülich
Germany
Summary
👤
Senior🎓
Top SchoolSanjay Srikakulam is a scientific researcher and seasoned bioinformatics DevOps engineer with 8+ years building and operating research infrastructures across German academia and Helmholtz institutes. He combines a PhD-level background in bioinformatics with hands-on expertise in provisioning and automating bare-metal, HPC and OpenStack cloud environments using Terraform, Ansible, Jenkins and GitOps pipelines, and has driven Galaxy administration, monitoring and performance tuning at national and European scale. His contributions to the widely used Galaxy project span backend integrations, analytics configuration, Celery task automation and CI/test environment hardening, reflecting a blend of application-level development and reliable platform engineering. Comfortable moving between molecular simulation, machine learning pipelines and SRE practices, he also champions green computing through meta-scheduling and distributed execution to cut research carbon footprints. Based in Germany, he pairs publication-grade research rigor with pragmatic system-building and strong collaborator-facing communication.
8 years of coding experience
8 years of employment as a software developer
B.Tech, Bioinformatics, 8.190, B.Tech, Bioinformatics, 8.190 at SRM UniversityDoctor of Philosophy - PhD, Bioinformatics, Magna Cum Laude, Doctor of Philosophy - PhD, Bioinformatics, Magna Cum Laude at Universität des Saarlandes
English, Telugu, Tamil, German
Stackoverflow
9reputation
5kreached
0answers
3questions
Github Skills (24)
back-end-development10
python10
bash10
automation10
ansible10
ansible-galaxy10
automations10
devops10
mako10
celery9
dockers9
docker9
user-manual9
trainings9
bioinformatics8
Programming languages (11)
Github contributions (5)
galaxyproject/galaxy
Feb 2023 - Mar 2025
Data intensive science for everyone.
Role in this project:
Back-end Developer
Back-end DeveloperContributions:10 reviews, 9 PRs, 37 comments in 2 years 1 month
Contributions summary:Sanjay primarily contributed to the Galaxy project by modifying Mako templates, specifically focusing on the integration and configuration of analytics scripts like Plausible. Their work involved updating script names, configuring analytics settings, and adding WebDAV as a user file source. Additionally, the user addressed linting issues, removed a configuration parameter, and added a Celery task for cleaning up job working directories, further showcasing their involvement in both application logic and background processes.
pythonsciencepipelinednadata-science
galaxyproject/training-material
Apr 2023 - Feb 2025
A collection of Galaxy-related training material
Role in this project:DevOps Engineer
DevOps EngineerContributions:3 reviews, 3 PRs, 2 comments in 1 year 10 months
Contributions summary:Sanjay's commits primarily focused on configuring and maintaining the build environment for Galaxy training materials. They added and modified Ansible host groups within `knit-frog.py` related to database and monitoring servers. The user also updated scripts to correctly substitute the hostname within automated test environments. These changes suggest a focus on automating infrastructure and ensuring the proper operation of testing and build processes.
chip-seqmetagenomicsrnaseqtraining-materialusegalaxy
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