Sara Rosenthal
Associate Director For Research
California, United States
Summary
👤
Senior🎓
Top SchoolSara Rosenthal is a computational biologist and research leader with over a decade of experience turning large-scale genomic, single-cell, and spatial datasets into clinical and biological insights. As Associate Director for Research at UC San Diego’s CCBB she directs multi-omics strategy across 50+ interdisciplinary projects in oncology, neurodevelopmental disorders, and precision medicine, combining machine learning and network biology to nominate therapeutic targets and biomarkers. She has built and led cross-functional teams to create reproducible, cloud-enabled pipelines (AWS, GCP, Slurm) and has co-authored 50+ papers in top journals like Science, Nature, Cell, and PNAS. Trained as a physicist at Princeton, Sara brings a quantitative systems perspective—evident from earlier work modeling collective behavior—to complex biological problems, bridging discovery and translational applications.
10 years of coding experience
7 years of employment as a software developer
Bachelor of Arts (B.A.), Physics, Bachelor of Arts (B.A.), Physics at Cornell UniversityPhD, Physics, PhD, Physics at Princeton University
Github Skills (41)
pluto10
binder10
network-visualization9
cytoscapejs9
ipywidgets9
jupyter-widget9
jupyter-notebook8
regl8
localization8
internationalization8
notebook8
jupyter8
translation7
gwas5
r-package5
Programming languages (4)
Github contributions (5)
ucsd-ccbb/visJS2jupyter
Aug 2016 - Dec 2018
visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells
Contributions:75 commits, 2 PRs, 73 pushes in 2 years 4 months
jupyter-notebooknotebooknetwork-visualizationvis-jscytoscapejs
ucsd-ccbb/NetColoc
Oct 2020 - Oct 2022
development of network co-localization tool
Contributions:65 commits, 1 PR, 46 pushes in 2 years
translationinternationalizationlocalizationlocalization-tooli18n
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