Sarah Bonnin
Manager, Discovery & Translational Science
Barcelona, Catalonia, Spain
Summary
👤
Senior🎓
Top SchoolSarah Bonnin is a bioinformatics leader with nine years of experience turning complex NGS datasets into actionable insights, now managing Discovery & Translational Science at Clarivate in Barcelona. She specializes in transcriptomics—including bulk, single-cell and atlas building—and genomics, combining deep R/Bioconductor expertise with Python (scanpy) and shell scripting to deliver reproducible analyses. A practiced instructor and Software Carpentries-certified trainer, she builds and teaches practical R and data-visualization courses used in academic and internal research settings. Sarah also coordinates scientific communication, having moderated a Clarivate webinar on drug repurposing, and maintains an active GitHub presence and ORCID for transparent, open work. Comfortable with workflow containerization and Nextflow pipelines, she bridges hands-on bioinformatics with project management to move projects from data to publication-ready outcomes. Her background spans major European research centers, giving her both academic rigor and industry-focused delivery.
10 years of coding experience
14 years of employment as a software developer
Master's degree (1st year) Bioinformatics/Genomics, Master's degree (1st year) Bioinformatics/Genomics at Université Paris CitéDEUG Biology, DEUG Biology at Université Claude Bernard Lyon 1Bachelor Biology, Bachelor Biology at University of Waterloo
French, English, Spanish, Catalan
Github Skills (42)
rna-seq10
d3-heatmap9
dendextend9
dendrogram9
cran8
heatmap8
knitr8
r8
single-cell-genomics7
bioinformatics7
nextflow7
stable7
rmarkdown7
data-wrangling6
pypi5
Programming languages (12)
Github contributions (5)
sarahbonnin/CRG_RIntroduction
Oct 2018 - Aug 2019
Contributions:300 pushes, 1 branch in 11 months
biocorecrg/CRG_RIntroduction
Jun 2019 - Feb 2021
Contributions:1 release, 37 pushes, 1 branch in 1 year 8 months
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