Sarah Song
Research Bioinformatician II
Los Angeles, California, United States
Summary
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Senior🎓
Top SchoolSarah Song is a Research Bioinformatician II with 9 years of experience specializing in RNA-seq, single-cell and spatial transcriptomics, and NGS pipeline automation. Based in Los Angeles, she has driven analysis for 20+ bulk and 10+ single-cell/spatial projects at Cedars-Sinai, combining hands-on QC, integration, trajectory and pathway analyses with tools like Seurat, Scanpy, Monocle and clusterProfiler. She’s proficient in R/Bioconductor, Python, Bash and workflow tooling (Nextflow, Conda, Git) and has a track record of cutting manual setup time through PHP-driven script generation and pipeline optimizations. A former MSc researcher, she also built de novo transcriptome assemblies and phylogenetic comparative analyses, bringing both computational rigor and wet-lab fluency to cross-disciplinary teams.
9 years of coding experience
1 year of employment as a software developer
Master of Science - MS Biology Evolutionary Biology Bioinformatics , Master of Science - MS Biology Evolutionary Biology Bioinformatics at McMaster University
Hakka, French, Chinese, Chinese, EnglishGithub contributions (5)
XueSarahSong/Thesis
Aug 2016 - Nov 2018
Contributions:218 commits, 215 pushes, 3 branches in 2 years 3 months
Sarahxys/IRIC_miRBooking
May 2017 - Aug 2017
Contributions:77 commits, 75 pushes, 1 branch in 3 months
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