Sebastian Paez

Data Scientist

Seattle, Washington, United States
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Summary

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Senior
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Top School
Sebastian Paez is a data scientist and computational mass spectrometrist with 11 years of experience applying machine learning, statistics, and bioinformatics to cancer biology and proteomics. Holding a PhD-level background from Purdue, he has developed custom analysis pipelines and R packages for bulk and single-cell sequencing and contributed to mass-spec software as a recurrent reviewer for the Journal of Open Source Software. At Talus Bio he translates complex biological datasets into actionable insights in interdisciplinary teams, drawing on hands-on wet-lab experience from earlier kinase substrate and proteomics work. A frequent open-source contributor and occasional woodworker in his spare time, he bridges experimental biology and reproducible computational tools to accelerate translational research.
code11 years of coding experience
job1 year of employment as a software developer
bookBiologist, Biology/Biological Sciences, General, Biologist, Biology/Biological Sciences, General at Universidad Nacional de Colombia
bookDoctor of Philosophy - PhD, Oncology and Cancer Biology, Doctor of Philosophy - PhD, Oncology and Cancer Biology at Purdue University
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Github Skills (200)

cran10
mass10
python10
seq10
ipython10
deep-learning10
strip10
polygon10
dia10
mass-spectrometry10
heatmap10
ai10
ipython-magic10
lightning10
artificial-intelligence10

Programming languages (16)

C#MDXJavaC++RustCNextflowGo

Github contributions (5)

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jspaezp/sctree

Mar 2019 - Apr 2022

Tree based marker finding and gating visualization for single cell rna seq data
Contributions:58 commits, 13 PRs, 69 pushes in 3 years 2 months
markerfindingtree-basedrna-seqrna-seq-data
jspaezp/elfragmentador-data

Mar 2021 - Feb 2023

Contributions:3 PRs, 122 pushes, 6 branches in 1 year 10 months
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