Seongmin Choi
Resident Physician at Englewood Hospital
Fairview, New Jersey, United States
Summary
👤
Senior🎓
Top SchoolSeongmin Choi is an internal medicine resident and computational biologist with nine years of experience bridging clinical practice and cancer genomics. After earning an MD and an MS in bioinformatics from Seoul National University, he contributed to large-scale cancer genome projects at Memorial Sloan Kettering, developing pipelines for mutation signatures, single-cell and long-read analyses, and neoantigen detection. Now training in internal medicine at Englewood Hospital, he aims to pursue hematology–oncology fellowship to integrate bedside care with genomic-driven cancer research. Known for loving the terminal, he brings hands-on software engineering, high-performance computing, and pipeline-building skills to translational oncology problems. He combines rigorous clinical training with a rare depth in bioinformatics, enabling rapid prototyping of reproducible genomics workflows that inform patient-centered research.
10 years of coding experience
6 years of employment as a software developer
Doctor of Medicine - MD, Medicine, Doctor of Medicine - MD, Medicine at Seoul National University
Korean, English, German
Github Skills (59)
csv10
reconciliation9
caller9
tui9
json9
structural-variation9
eda9
spreadsheet9
genome9
python-scripts9
sequencing9
bioinformatics9
transcriptomics9
cli9
genomics9
Programming languages (10)
Github contributions (5)
soymintc/dvartk
Aug 2022 - Apr 2024
Contributions:1 release, 29 pushes, 1 branch in 1 year 8 months
soymintc/tumor-seg-web
Dec 2019 - Nov 2022
Brain tumor segmentation web service to predict the segmentation of 3D brain MRI images.
Contributions:25 commits, 10 PRs, 23 pushes in 2 years 11 months
3dsegmentationwebservice
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