Seung Lee
PHD Student at University of Southern California
Los Angeles, California, United States
Summary
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Senior🎓
Top SchoolSeung Lee is a PhD student in Quantitative and Computational Biology at USC with eight years of experience combining computer science and bioinformatics to solve biological problems. His work spans amino acid encoding and protein embedding, virus classification, and human gut microbiome analysis using machine learning and deep learning approaches. He has practical systems and programming roots—from compiler optimization and C++/OpenCL development to web server engineering—giving him a rare blend of low-level performance awareness and applied biological modeling. Based in Los Angeles, he teaches and mentors in C++ programming while driving research that bridges algorithmic rigor with real-world biological datasets. Notably, his background includes both academic research and production-oriented software work, enabling him to move projects from prototype to reproducible research.
8 years of coding experience
3 years of employment as a software developer
Doctor of Philosophy - PhD, Computational Biology & Bioinformatics, Doctor of Philosophy - PhD, Computational Biology & Bioinformatics at University of Southern CaliforniaMaster of Science - MS, Computer Science, Master of Science - MS, Computer Science at 한양대학교
Github Skills (14)
rna-seq1
classification1
seq1
python1
shotgun1
bash1
illumina1
data-management1
raw-data1
metagenomics1
bioinformatics1
pipeline1
procedure1
profiling1
Programming languages (2)
Github contributions (5)
DMnBI/MDL4Microbiome
May 2021 - Dec 2021
Contributions:7 commits, 10 pushes, 1 comment in 7 months
withJack/2018_HYU_CASS_LAB
Oct 2018 - Aug 2021
Contributions:4 pushes, 1 branch in 2 years 11 months
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