Shabhonam Caim
Senior Bioinformatics Support Scientist
Cambridge, England, United Kingdom
Summary
👤
Senior🎓
Top SchoolShabhonam Caim is a senior bioinformatics scientist with over a decade of hands-on experience delivering end-to-end software and data solutions for genomics workflows, currently leading reagent rental program software at Illumina across Europe. He combines deep domain expertise in NGS analysis, cancer genomics and machine learning with practical engineering skills in Python, Linux, CI/CD and cloud architectures (GCP/AWS), and has led multiple migrations of bioinformatics pipelines to the cloud. Prior roles at Cambridge Epigenetix, Quadram Institute and Earlham Institute reflect a track record in LIMS, primary analysis pipelines, big-data visualization and HPC-driven automation. Known for bridging research and production, he pairs scientific rigor with pragmatic software delivery to turn complex genomics requirements into reliable, scalable systems. An MSc in Bioinformatics and repeated contributions to pipeline development hint at a strong foundation in both algorithmic and operational aspects of genomics computing.
10 years of coding experience
12 years of employment as a software developer
Bachelor of Technology (BTech), Bioinformatics, Distinction, Bachelor of Technology (BTech), Bioinformatics, Distinction at Dr. D.Y.Patil Institute of Biotechnology and BioinformaticsMSc, Bioinformatics, MSc, Bioinformatics at University of East Anglia
Github Skills (16)
python9
statistics9
machine-learning8
data-analysis8
data-science8
scikit7
scikit-learn7
genomics1
mer1
ncbi1
infectious-diseases1
genome1
pathogen1
bioconda1
bioinformatics1
Programming languages (2)
Github contributions (5)
Shabhonam/Plotting
Nov 2017 - Aug 2018
Contributions:25 commits, 24 pushes, 1 branch in 8 months
Shabhonam/16S-Metagenomics-Scripts-Three-baby-paper
Jun 2018 - Nov 2018
Contributions:6 pushes, 1 branch in 4 months
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