Shalabh Thakur - Sr. Staff Data Engineer, Pharma 4.0

Shalabh Thakur

Sr. Staff Data Engineer, Pharma 4.0

Old Toronto, Ontario, Canada

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Summary

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Senior

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Top School

Shalabh Thakur is a Sr. Staff Data Engineer specializing in Pharma 4.0 with nine years of experience turning complex, regulated biological data into production-ready data and AI platforms. He has built and scaled ETL/ELT pipelines and feature extraction workflows on AWS for large genomics and oncology datasets, enabling ML-driven drug target prediction and supporting executive decision-making through BI dashboards. His background blends a PhD in bioinformatics and hands-on data engineering, giving him deep domain expertise in sequencing data, comparative genomics, and high-throughput pipelines. Shalabh has led cross-functional collaborations across research, clinical, legal, and vendor teams, authored research publications tied to production projects, and mentored interns evaluating BI tooling at enterprise scale. He’s comfortable bridging research-grade analysis and robust, auditable production systems—an asset in regulated pharma environments where data provenance and reproducibility matter. Based in Toronto, he pairs academic rigor with practical cloud-native engineering to accelerate biotech productization.

9 years of coding experience

5 years of employment as a software developer

B.Sc, Bioinformatics, B.Sc, Bioinformatics at Sardar Patel University, Vallabh Vidyanagar

Certificate Program, Applied Machine Learning, Certificate Program, Applied Machine Learning at WeCloudData

Doctor of Philosophy - Ph.D., Bioinformatics, Data analysis, Database Management, Comparative Genomic, Evolution, Sequencing data, Doctor of Philosophy - Ph.D., Bioinformatics, Data analysis, Database Management, Comparative Genomic, Evolution, Sequencing data at University of Toronto

Github Skills (9)

beancount5

amazon-athena4

amazon4

aws4

athena4

pipeline3

metagenomics3

bioinformatics3

metabase1

Programming languages (2)

ClojurePython

Github contributions (5)

thakurshalabh08/Python_Scripts

Jul 2017 - May 2019

Contributions:8 commits, 6 pushes, 1 branch in 1 year 9 months

thakurshalabh08/Multiminimus

Oct 2017 - May 2019

Contributions:2 pushes, 1 branch in 1 year 7 months

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