Shing Zhan

NDPH Intermediate Fellow

Oxford, England, United Kingdom
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Summary

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Senior
🎓
Top School
Shing Zhan is a bioinformatics scientist and independent NDPH Fellow at the University of Oxford with 11+ years of experience translating genomic data into clinical and diagnostic impact. He combines a strong academic record (PhD in Bioinformatics, 29 publications and a patent application) with industry R&D leadership, having guided assay development at a molecular diagnostics startup and served as a translational genomics fellow. Skilled in large-scale sequence data wrangling, comparative genomics, metagenomics and integration of heterogeneous clinical datasets, he repeatedly delivers end-to-end projects across multidisciplinary, international teams. Notably, he has experience moving between academia and product-focused roles—developing four RUO assay products while on leave from his doctoral studies to build a startup—bringing both scientific rigor and practical product delivery to translational genomics.
code11 years of coding experience
job8 years of employment as a software developer
bookPh.D., Bioinformatics, Ph.D., Bioinformatics at The University of British Columbia
languagesChinese, English
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Github Skills (54)

phylogenetics10
bioinformatics10
genomics10
r-package9
args9
python9
inference9
genetic9
graph9
infer9
science9
discrete-optimization8
sequence8
azerothcore8
particle-swarm-optimization8

Programming languages (7)

C++RRustJavaScriptJupyter NotebookHyPhyPython

Github contributions (5)

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szhan/sc2ts-paper

Mar 2023 - Jul 2026

Contributions:330 pushes, 136 branches in 3 years 4 months
szhan/tsimpute

Jun 2023 - Mar 2025

Genome-wide genotype imputation using tree sequences.
Contributions:203 PRs, 251 pushes, 207 branches in 1 year 9 months
bioinformaticsgenomicstree-sequences
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