Shinya Ito

Scientist III at Allen Institute

Seattle, Washington, United States
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Summary

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Senior
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Top School
Shinya Ito is a physicist-turned-computational neuroscientist with 15 years of experience building and analyzing biophysically detailed models of mouse visual cortex and running large-scale silicon-probe electrophysiology experiments. At the Allen Institute he leads model development and hardware/software integration, combining hands-on recording (256-channel probes) with advanced statistical analysis to link circuit physiology to behavior. His work spans academia and industry roles, including high-impact publications (cover article in Journal of Neuroscience) and sustained contributions to experimental platform engineering. Based in Seattle, he brings deep quantitative training from a Physics PhD and a track record of turning complex datasets into mechanistic, reproducible models of sensory processing.
code15 years of coding experience
job5 years of employment as a software developer
bookDoctor of Philosophy (PhD) Physics, Doctor of Philosophy (PhD) Physics at Indiana University Bloomington
bookBachelor of Science (BS) Physics, Bachelor of Science (BS) Physics at Hokkaido University
languagesEnglish, Japanese
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Github Skills (15)

simulation10
neuroscience10
agent-based-modeling10
computational-neuroscience10
neurons10
python10
simulator10
modeling10
nest9
simulation-framework9
cpp9
machine-learning8
nest-simulator8
tensorflow3
macos2

Programming languages (4)

ShellC++Jupyter NotebookPython

Github contributions (5)

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Contributions:17 commits, 3 pushes, 1 branch in 8 years 10 months
Functional properties of different cell types in the primary visual cortex (V1) derived from the Allen Institute extracellular electrophysiology (Neuropixels) data
Contributions:3 releases, 1 PR, 14 pushes in 3 years 2 months
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