Simon Frost

Principal Scientist at DIOSynVax

Redmond, Washington, United States
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Summary

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Senior
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Top School
Simon Frost is a Principal Scientist and infectious disease modeler with 14 years of experience translating pathogen evolution and epidemiology into operational biosurveillance and vaccine design. He splits his time between Microsoft Premonition and Microsoft Discovery—where he serves as a biology SME—and academic roles at LSHTM and previously Cambridge, building FAIR end-to-end modeling platforms that inform policy. As co-founder and Principal Data Scientist at DIOSynVax he applies bioinformatics and AI to design broadly reactive vaccine antigens for threats like Ebola, Lassa and influenza. A trained evolutionary virologist (ScD, Cambridge; PhD, Oxford), he pairs deep domain expertise with hands-on software engineering—publishing reproducible modeling code via GitHub (epirecipes) to bridge research and production. Notably, his work spans both within- and between-host dynamics, bringing evolutionary insight directly into operational public-health tools.
code14 years of coding experience
job8 years of employment as a software developer
bookDoctor of Philosophy (Ph.D.), Zoology, Doctor of Philosophy (Ph.D.), Zoology at University of Oxford
bookScD, Viral Evolution, ScD, Viral Evolution at University of Cambridge
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Github Skills (200)

stochastic-processes10
markov10
stochastic-differential-equations10
julia10
scientific-machine-learning10
dde10
ode10
delay-differential-equations10
pde10
dynamical-systems10
differential-equations10
ord9
event-handling9
structural-variation9
crawler9

Programming languages (25)

C#CGoCommon LispHTMLJupyter NotebookMATLABPostScript

Github contributions (5)

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sdwfrost/Gillespie.jl

Apr 2014 - Nov 2020

Stochastic Gillespie-type simulations using Julia
Contributions:7 releases, 108 commits, 10 PRs in 6 years 8 months
julia
sdwfrost/eid_presentation

Jul 2014 - Jan 2019

Contributions:10 commits, 1 push in 4 years 7 months
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