Soufiane Mourragui

Senior AI ML Scientist at Ensocell

Cambridge, England, United Kingdom
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Summary

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Senior
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Top School
Soufiane Mourragui is a Senior AI/ML Scientist and computational biologist based in Cambridge with 10 years of experience applying advanced machine learning and applied mathematics to single-cell and cancer genomics. He earned a PhD in Computational Biology and has progressed from academic research—developing transfer learning methods to link pre-clinical models and human tumors—to industry roles at Ensocell where he now leads AI/ML efforts for single-cell applications. His background spans high-performance computing, nanopore sequencing analysis, and designing large-scale ML systems for metagenomics and drug response prediction. Notably, he has navigated multi-stakeholder consortia and won the BioSB Young Investigator Award, reflecting both technical depth and collaborative leadership. He combines rigorous quantitative training from MINES ParisTech with hands-on software engineering in Python and production ML, making him adept at translating complex biological questions into scalable computational solutions.
code10 years of coding experience
job1 year of employment as a software developer
bookMathematics and physics, Admitted to Mines ParisTech, Mathematics and physics, Admitted to Mines ParisTech at Lycée Pierre Corneille
bookDoctor of Philosophy - PhD, Computational Biology, Doctor of Philosophy - PhD, Computational Biology at Delft University of Technology
bookIngénieur Civil des Mines de Paris, Geostatistics and Applied Probability, Ingénieur Civil des Mines de Paris, Geostatistics and Applied Probability at MINES ParisTech
languagesFrench, English, German, Arabic, Dutch
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Github Skills (28)

variational-autoencoder10
gene-expression10
cancer-genomics9
hierarchical9
autoencoder9
single-cell-analysis9
tsne9
density-estimation8
topological-data-analysis8
single-cell-genomics8
temporal-data7
probabilistic7
genomics6
deep-learning6
scanpy6

Programming languages (3)

HTMLJupyter NotebookPython

Github contributions (5)

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NKI-CCB/PRECISE

Jan 2019 - Dec 2022

Contributions:2 reviews, 17 commits, 10 PRs in 3 years 11 months
NKI-CCB/TRANSACT_manuscript

Oct 2020 - Jan 2023

Scripts supporting TRANSACT manuscript
Contributions:23 commits, 11 PRs, 20 pushes in 2 years 3 months
transactmanuscriptsupporting
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Soufiane Mourragui - Senior AI ML Scientist at Ensocell