Stefania Marcotti
BioImage Analysis Trainer at Royal College of Physicians
London, England, United Kingdom
Summary
👤
Senior🎓
Top SchoolStefania Marcotti is a bioimage analysis expert and trainer based in London with around a decade of experience turning microscopy data into rigorous, reproducible quantitative insights. She has built and led institute-level support services and workshops, developed multiple open-source image-analysis tools, and routinely crafts automated Python-based pipelines for diverse life-science projects. Stefania combines hands-on research (15+ publications, collaborations at places like Janelia and Kyoto) with practical training delivery, emphasising live coding and open-source toolchains to empower experimentalists. Equally comfortable advising on study design and implementing reproducible workflows, she brings project management discipline to deliver timely, implementable solutions across academic and clinical settings. An avid computational tinkerer, she pairs deep domain knowledge in imaging with continuous upskilling in ML and cloud-enabled analysis methods.
8 years of coding experience
8 years of employment as a software developer
Online specialisation, Applied Data Science with Python, Online specialisation, Applied Data Science with Python at CourseraAmazon Web Services Machine Learning scholarship foundations course, Amazon Web Services Machine Learning scholarship foundations course at UdacityDeep Learning for Microscopy Image Analysis, Deep Learning for Microscopy Image Analysis at Marine Biology Laboratory (The University of Chicago)EMBO Practical Course: Computational Optical Biology, EMBO Practical Course: Computational Optical Biology at European Molecular Biology LaboratoryBioimage Analysis with Python, Bioimage Analysis with Python at Image analysis focused interest group of the royal microscopy societyErasmus program, Biomedical/Medical Engineering, Erasmus program, Biomedical/Medical Engineering at Eindhoven University of TechnologyDoctor of Philosophy - PhD, Mechanical Engineering, Doctor of Philosophy - PhD, Mechanical Engineering at The University of SheffieldMaster of Science - MS, Bioengineering and Biomedical Engineering, Master of Science - MS, Bioengineering and Biomedical Engineering at Politecnico di Milano
French, English, Italian
Github Skills (12)
python8
stable8
segment7
data-visualisation7
data-wrangling7
web-application6
imaging6
annotate5
jekyll5
data-visualization5
computer-vision4
brain-imaging4
Programming languages (4)
Github contributions (5)
OakesLab/AFT-Alignment_by_Fourier_Transform
Apr 2021 - Feb 2022
Contributions:1 release, 48 commits, 2 PRs in 9 months
stemarcotti/PIV
Oct 2018 - Aug 2021
Contributions:1 release, 15 commits, 10 pushes in 2 years 11 months
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