Thomas Evangelidis

Founder, CEO & CSO at AI|ffinity

Prague, Czechia
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Summary

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Senior
🎓
Top School
Thomas Evangelidis is an AI/ML software developer and founder with 17 years of experience translating complex R&D problems into production-ready algorithms and scientific software, currently focused on generative and agentic AI for decision support and scientific automation. He founded and led AI|ffinity—growing it to a 12-person TechBio team, securing ~€2M in non-dilutive funding and €0.5M in investment, and delivering experimentally validated small-molecule hits through integrated NMR, AI, and cheminformatics workflows. His background in cheminformatics, computational and structural biology, and protein NMR underpins hands-on work in LLM-driven knowledge extraction, automated NMR analysis, and closed-loop model retraining for drug discovery. Now an independent consultant, he combines agentic AI research pipelines with founder-level due diligence to support competitive intelligence and market landscape analysis in biotech and life-science investing, publishing open-source tools to reproduce his workflows. Notably, he pairs deep domain expertise with practical product delivery—having shipped tools like 4D-GraFID and deepHitExplorer that bridged method development and experimental validation.
code10 years of coding experience
job8 years of employment as a software developer
bookMaster of Philosophy (MPhil), Pharmaceutical Sciences, Master of Philosophy (MPhil), Pharmaceutical Sciences at The University of Manchester
bookDoctor of Philosophy (PhD), Pharmaceutical Sciences, Doctor of Philosophy (PhD), Pharmaceutical Sciences at Ethnikon kai Kapodistriakon Panepistimion Athinon
bookMaster's degree, Computational Biology, 75% Distinction (awarded when >70%), Master's degree, Computational Biology, 75% Distinction (awarded when >70%) at University of York
bookBachelor's degree, Molecular Biology, overall GPA = 8.43/10 (last 3 years 9.17/10) [GPA>=8.5 -> Excellent], Bachelor's degree, Molecular Biology, overall GPA = 8.43/10 (last 3 years 9.17/10) [GPA>=8.5 -> Excellent] at Democritus University of Thrace
languagesEnglish, German, Czech, French, Greek
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Github Skills (46)

molecule10
prediction10
proteins10
reinforcement-learning9
parallel9
drug-discovery9
message-passing9
chemistry9
optimization9
ray9
python8
deep-learning8
machine-learning8
java8
pytorch8

Programming languages (2)

C++Python

Github contributions (5)

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tevang/4D-CHAINS

Jun 2017 - Oct 2021

Contributions:29 commits, 26 pushes, 1 branch in 4 years 5 months
tevang/tutorials

Dec 2018 - Jan 2021

Contributions:60 commits, 58 pushes, 1 branch in 2 years
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Thomas Evangelidis - Founder, CEO & CSO at AI|ffinity