Thomas Haverkamp
Researcher At Department Of Epidemiology at Norwegian Veterinary Institute
Oslo, Norway
Summary
👤
Senior🎓
Top SchoolThomas Haverkamp is a microbiome specialist and researcher at the Norwegian Veterinary Institute with 11 years of experience in bioinformatic analysis of microbial genomes and communities using high-throughput sequencing. He bridges lab and computational workflows, handling large datasets from all major sequencing platforms and driving projects that require clear communication between bench and bioinformatics. An experienced PhD-level instructor, he enjoys teaching microbial community analysis and sharing practical scripts and workflows via his GitHub. Based in Oslo, he combines deep domain knowledge in microbiology with hands-on computational expertise, enabling reproducible, end-to-end genomic studies.
11 years of coding experience
Msc, Biology, Msc, Biology at Utrecht UniversityVWO, VWO at Christelijk Lyceum Arnhem
English, Dutch, Norwegian, German
Github Skills (111)
os-agnostic10
ecosystem9
binning9
linux9
package-management9
python9
shotgun9
bioinformatics9
illumina9
conda9
pathogen9
metagenomics9
documented8
ncbi8
nextflow8
Programming languages (9)
Github contributions (5)
Thomieh73/Useful_scripts
May 2015 - May 2019
Contributions:10 pushes, 2 branches, 20 issues in 4 years
NorwegianVeterinaryInstitute/Nepal
Nov 2021 - Jan 2025
NExtflow Pipeline for AmpLicons
Contributions:1 release, 25 PRs, 23 pushes in 3 years 3 months
nextflow-pipelinepipelineampliconsnextflowworkflow
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