Toan Phung
Postdoctoral Research Assistant at MRC Protein Phosphorylation and Ubiquitylation Unit
Dundee, Scotland, United Kingdom
Summary
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Senior🎓
Top SchoolToan Phung is a proteoinformatics-focused postdoctoral researcher and workflow developer with 10 years' experience bridging wet-lab proteomics and production-ready bioinformatics tooling. Based in Dundee, he architects automated pipelines for proteomics, metabolomics and lipidomics—particularly applied to Parkinson’s Disease—using Python, Go and JavaScript to deliver CLI and web-based solutions. His PhD and hands-on background in cloning, recombinant protein expression and mass spec sample prep give him rare end-to-end fluency from bench to code. He combines systematic analyses of glycosylation and peptide identification with pragmatic software engineering to make complex omics datasets shareable and reproducible. Colleagues rely on him to translate experimental needs into robust, automated workflows that scale for collaborative research.
10 years of coding experience
Doctor of Philosophy (Ph.D.), Biochemistry and Molecular Biology, Doctor of Philosophy (Ph.D.), Biochemistry and Molecular Biology at The University of QueenslandBachelor of Science (B.Sc.), Biochemistry, Bachelor of Science (B.Sc.), Biochemistry at University of Montana
Vietnamese, English
Github Skills (15)
automation10
data-visualization10
loops10
stable10
python10
matplotlib10
data-analysis10
numpy9
mass-spectrometry3
placement3
quantile3
visualize3
evolutionary2
bioinformatics2
visualization2
Programming languages (7)
Github contributions (5)
noatgnu/nglygo
Jun 2018 - Apr 2021
Contributions:2 PRs, 10 pushes, 2 branches in 2 years 11 months
noatgnu/reformatMS
Mar 2018 - Mar 2020
reformat MS result with FDR filtering
Contributions:10 releases, 1 PR, 25 pushes in 2 years
filteringreformatfdr
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